Screening and AFTB detected by UC (2018-2021)

AFTB cases and screening by UC

Of 991,338 people screened, coordinates of screening sites were missing for 290,854 (29%) people.

Below is a series of maps showing the distribution of AFTB cases and people screened across UCs by year. People with screening site coordinates (n = 700,484) were included. The table shows the available observations by year.

Year	Number of observations
2018	293,532
2019	378,299
2020	265,929
2021	53,578

2018-2021

2018

2019

2020

2021

Reproducibility

Reproducibility receipt

[1] "2023-02-15 23:32:00 +08"

Local:    main /Users/zawmy/GitHub/zero_tb_v1
Remote:   main @ origin (https://github.com/zawmtun/zero_tb_v1.git)
Head:     [02b2661] 2023-02-14: get coordinates outside Karachi and fix AFTB as per rabia/maria's suggestion

R version 4.2.2 (2022-10-31)
Platform: aarch64-apple-darwin20 (64-bit)
Running under: macOS Ventura 13.1

Matrix products: default
BLAS:   /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/lib/libRlapack.dylib

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] htmltools_0.5.4   leaflet_2.1.1     sf_1.0-9          quarto_1.2       
 [5] readxl_1.4.1      forcats_0.5.2     stringr_1.5.0     dplyr_1.0.10     
 [9] purrr_0.3.5       readr_2.1.3       tidyr_1.2.1       tibble_3.1.8     
[13] ggplot2_3.4.1     tidyverse_1.3.2   tarchetypes_0.7.3 targets_0.14.1   
[17] dotenv_1.0.3      conflicted_1.1.0  knitr_1.41       

loaded via a namespace (and not attached):
 [1] fs_1.5.2            lubridate_1.9.0     httr_1.4.4         
 [4] rprojroot_2.0.3     tools_4.2.2         backports_1.4.1    
 [7] utf8_1.2.3          R6_2.5.1            KernSmooth_2.23-20 
[10] DBI_1.1.3           colorspace_2.1-0    withr_2.5.0        
[13] tidyselect_1.2.0    processx_3.8.0      git2r_0.30.1       
[16] compiler_4.2.2      cli_3.6.0           rvest_1.0.3        
[19] xml2_1.3.3          scales_1.2.1        classInt_0.4-8     
[22] proxy_0.4-27        callr_3.7.3         digest_0.6.31      
[25] rmarkdown_2.18      pkgconfig_2.0.3     parallelly_1.32.1  
[28] highr_0.9           dbplyr_2.2.1        fastmap_1.1.0      
[31] htmlwidgets_1.5.4   rlang_1.0.6         rstudioapi_0.14    
[34] generics_0.1.3      jsonlite_1.8.4      crosstalk_1.2.0    
[37] googlesheets4_1.0.1 magrittr_2.0.3      Rcpp_1.0.10        
[40] munsell_0.5.0       fansi_1.0.4         lifecycle_1.0.3    
[43] furrr_0.3.1         stringi_1.7.8       yaml_2.3.6         
[46] grid_4.2.2          parallel_4.2.2      listenv_0.8.0      
[49] crayon_1.5.2        haven_2.5.1         hms_1.1.2          
[52] ps_1.7.2            pillar_1.8.1        igraph_1.3.5       
[55] base64url_1.4       codetools_0.2-18    reprex_2.0.2       
[58] glue_1.6.2          evaluate_0.18       data.table_1.14.6  
[61] modelr_0.1.10       vctrs_0.5.2         tzdb_0.3.0         
[64] cellranger_1.1.0    gtable_0.3.1        future_1.29.0      
[67] assertthat_0.2.1    cachem_1.0.6        xfun_0.35          
[70] broom_1.0.1         e1071_1.7-13        later_1.3.0        
[73] class_7.3-20        googledrive_2.0.0   gargle_1.2.1       
[76] memoise_2.0.1       units_0.8-1         timechange_0.1.1   
[79] globals_0.16.2      ellipsis_0.3.2      here_1.0.1